Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015937776.1_cds_XP_016482925.1_74095
CDS Infomation

[gene=LOC107803670] [db_xref=GeneID:107803670] [protein=cellulose synthase-like protein E1] [protein_id=XP_016482925.1] [location=join(13262..13533,14051..14363,15895..16035,16234..16365,16461..16670,16785..17009,17131..17478,18084..18638)] [gbkey=CDS]
Sequence

ATGGGAAAGGCAAAATATGAGGCTTTGTTCGAGACCAAGAAGGCAAAGGGCAGGATACTA
TATAGGCTATTTGCCACTTCTCTGCTTTGTGGGATCATCTTGATTTGGAGTTACAGATTA
TATAACATACCAAAACCAGGCGAAAATGGCAGATTGGGTTGGATTGGAATGTTTGGTGCT
GAACTATGGTTCGGTTTTTACTGGCTCCTCACTCAATCTCTTCGTTGGAACAGAACTCAT
CGTCACACATTTAGAGACAGGCTCTTACAAAGGTATGAGAATGAGTTGCCAAGAGTAGAT
GTATTTGTGTGCACAGCTGATCCTGCAATAGAGCCACCAATTATGGTGATCAATACAGTT
TTATCAGTCATGTCATACAATTATCCACCACAAAAACTTAGTGTTTATCTCTCAGATGAT
GCTGGCTCTGTGATTACCTTTTATGCTTTGCTAGAGGCTTCTCGCTTCTCAAAACATTGG
CTTCCCTATTGTAAGAAATTCAATGTTGAGCCAAGATCACCAGCTGCCTATTTTACGTCT
TTGTCCATGTCAGATCAATCTGATGCAGATTTTTCCGAAATAAAGAGATTATATGACGAC
ATGGCAAACAGAATTGAAGGTGTATGCAGAGCTGGAGTAATCCCAGATAAAGCAATATTA
GAGCATACAGGATTTTCCAAATGGGATTCGTATTCATCCAAGGGAAACCATGCTTCCATC
TTGCAGGTATTAAGTGACAGCAGAGATGAAGAGACAAAGGACGTTGACGGAGTAATACTG
CCAACGTTGGTCTACTTGGCTCGGGAGAAGCGTCCCCAGCACTTCCATAATTTCAAAGCT
GGGGCGATGAATGCATTGATCAGGGTGTCCTCAGAGATCAGCAATGGGCCAATAATTCTA
AATGTAGATTGTGATATGTACTCAAACAACTCAAACTCAATTCAAGATACTCTTTGCTTC
TTTATGGATGAAGAAAAAAGTCATGAAATTGCATTTGTGCAGTTTCCACAATCTTTCGAA
AATACCACTAAAAATGAACTTTATGGTTCTCTAAGAGTAATCGATGGGGTGGAATTCCAT
GGTATGGATGGTAATGGAGGCCCTTTGTATACTGGAACTGGCTGCTTTCATAGGAGAGAC
ACCCTTTGTGGTAGAGAGTTTAGCAAGGATGCTCGGATTGATTTGAAGAGTGCACGCCCT
GGAAAAATGGAAGAAAATGTGCACGAGTTGGAAGAAAGACTAGAAATTTTAGCAAGTTGC
ACGTATGAGGAAAATACTCAATGGGGAAACGAGATTGGTTTGAAGTACGGGTGCCCCGTT
GAAGATGTATTGACCGGGTTGACAATTCAGTGCAAAGGTTGGAAATCTGTTTATTATAAA
CCAGAAAGGAAGGGATTTTTAGGGGTTACTGCAACTACTTTGGATCAGACATTAGTGCAA
CACAAGAGATGGTCCGAGGGCGATCTAATGATTCTGTTTTCAAAGTACAGCCCAGTTTGG
TATGGACTTGGAAAGCTCAATCCTGGCCTTTTGCTGGGGTATCTCACTTACTGCCTCTGG
TCTCCTAATTGCGTGGCGACACTCTACTACTCCATCGTCCCTTCCCTTTATCTACTCAAA
GGAATTTCCTTGTTTCCACAGGTTTCCAGCAAATGGTTTTTGCCATTTGCTTATGTGATA
ATCGCGGAACTAATATGCAGTTCTGCTGAATTTCTGTGGAGTGGTGGAACGATTTTGGGA
TGGTGGAATGAACTAAGAATGTGGCTTTATAAGAGAACAAGCTCTTACATCTTTGCCTTT
CTTGATGTCATGTTGAAGTTATTTGGTTCTTCTAATTCAACATTCATTGTCACTCCAAAA
GTTTCTGATGAGGATGTTTTGTTGAGATACAAGCAAGAAAAAATGGAATTTGGAAATGCT
TCACCTATGCTTACCATTTTGTCAACACTGGCAATGCTCAATCTGTTTTGCCTTGTGGGG
TTAGTGAAAGAACTGATCATAACCAGAGAAGTGGGATTGAAATATGCATTTGATACTATG
GCTTTGCAAATTTTGTTGTGTGGGTTTCTGGTTTTGATTAACTTGCCTTTGTACAATGGT
CTCTTCTTTAGGCAAGACAAGGGCAAGATTCCTAGCTCCACTGTAGTTCAGTCAGTTATT
TTTGCACTTTCATGTGTTGCATATGTGTATTATTAG

Peptide Sequence

PEP ID

XP_016482925.1
PEP Infomation

PREDICTED: cellulose synthase-like protein E1 [Nicotiana tabacum]
Sequence

MGKAKYEALFETKKAKGRILYRLFATSLLCGIILIWSYRLYNIPKPGENGRLGWIGMFGA
ELWFGFYWLLTQSLRWNRTHRHTFRDRLLQRYENELPRVDVFVCTADPAIEPPIMVINTV
LSVMSYNYPPQKLSVYLSDDAGSVITFYALLEASRFSKHWLPYCKKFNVEPRSPAAYFTS
LSMSDQSDADFSEIKRLYDDMANRIEGVCRAGVIPDKAILEHTGFSKWDSYSSKGNHASI
LQVLSDSRDEETKDVDGVILPTLVYLAREKRPQHFHNFKAGAMNALIRVSSEISNGPIIL
NVDCDMYSNNSNSIQDTLCFFMDEEKSHEIAFVQFPQSFENTTKNELYGSLRVIDGVEFH
GMDGNGGPLYTGTGCFHRRDTLCGREFSKDARIDLKSARPGKMEENVHELEERLEILASC
TYEENTQWGNEIGLKYGCPVEDVLTGLTIQCKGWKSVYYKPERKGFLGVTATTLDQTLVQ
HKRWSEGDLMILFSKYSPVWYGLGKLNPGLLLGYLTYCLWSPNCVATLYYSIVPSLYLLK
GISLFPQVSSKWFLPFAYVIIAELICSSAEFLWSGGTILGWWNELRMWLYKRTSSYIFAF
LDVMLKLFGSSNSTFIVTPKVSDEDVLLRYKQEKMEFGNASPMLTILSTLAMLNLFCLVG
LVKELIITREVGLKYAFDTMALQILLCGFLVLINLPLYNGLFFRQDKGKIPSSTVVQSVI
FALSCVAYVYY

Transcript Sequence

Gene sequence data has not been registered.